WormBase Tree Display for Variation: WBVar02070243
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WBVar02070243 | Name | Public_name | WBVar02070243 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00799518 | |||||||
F13A7.14.2:c.731_733del | ||||||||
CE42979:p.Ala247del | ||||||||
F26D2.2.1:c.-786_-784del | ||||||||
F13A7.14.1:c.731_733del | ||||||||
HGVSg | CHROMOSOME_V:g.16404977_16404979del | |||||||
Sequence_details | SMap | S_parent | Sequence | F26D2 | ||||
Flanking_sequences | CTACTTCTGCACCATTCCCACCGGCTCCTT | CTGCTGCTCCAGCACCTTCCCCGTTCAGCC | ||||||
Mapping_target | F26D2 | |||||||
Source_location | 225 | CHROMOSOME_V | 16404957 | 16404959 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00045357 | ||||||
WBGene00006375 | ||||||||
Transcript | F26D2.2.1 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F26D2.2.1:c.-786_-784del | |||||||
cDNA_position | 704-706 | |||||||
Exon_number | 1/8 | |||||||
F13A7.14.1 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F13A7.14.1:c.731_733del | |||||||
HGVSp | CE42979:p.Ala247del | |||||||
cDNA_position | 789-791 | |||||||
CDS_position | 731-733 | |||||||
Protein_position | 244-245 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | tCTGct/tct | |||||||
Amino_acid_change | SA/S | |||||||
F13A7.14.2 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F13A7.14.2:c.731_733del | |||||||
HGVSp | CE42979:p.Ala247del | |||||||
cDNA_position | 744-746 | |||||||
CDS_position | 731-733 | |||||||
Protein_position | 244-245 | |||||||
Exon_number | 4/5 | |||||||
Codon_change | tCTGct/tct | |||||||
Amino_acid_change | SA/S | |||||||
Method | WGS_Flibotte |