WormBase Tree Display for Variation: WBVar02069596
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WBVar02069596 | Name | Public_name | WBVar02069596 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00798871 | |||||||
C34E10.5.3:c.53_61del | ||||||||
C34E10.5.1:c.53_61del | ||||||||
CE29033:p.His19_Glu21del | ||||||||
C34E10.5.2:c.53_61del | ||||||||
HGVSg | CHROMOSOME_III:g.5230631_5230639del | |||||||
Sequence_details | SMap | S_parent | Sequence | C34E10 | ||||
Flanking_sequences | ATAATCTGTTTCCACAACAGGTCGCGGAGC | AACAGATGTCTTCTGGTTCTTCGCCCAAAA | ||||||
Mapping_target | C34E10 | |||||||
Source_location | 225 | CHROMOSOME_III | 5230592 | 5230600 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016408 | ||||||
Transcript | C34E10.5.3 | VEP_consequence | inframe_deletion | |||||
VEP_impact | MODERATE | |||||||
HGVSc | C34E10.5.3:c.53_61del | |||||||
HGVSp | CE29033:p.His19_Glu21del | |||||||
cDNA_position | 62-70 | |||||||
CDS_position | 53-61 | |||||||
Protein_position | 18-21 | |||||||
Exon_number | 2/11 | |||||||
Codon_change | cAGCATGAGGaa/caa | |||||||
Amino_acid_change | QHEE/Q | |||||||
C34E10.5.1 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | C34E10.5.1:c.53_61del | |||||||
HGVSp | CE29033:p.His19_Glu21del | |||||||
cDNA_position | 77-85 | |||||||
CDS_position | 53-61 | |||||||
Protein_position | 18-21 | |||||||
Exon_number | 2/11 | |||||||
Codon_change | cAGCATGAGGaa/caa | |||||||
Amino_acid_change | QHEE/Q | |||||||
C34E10.5.2 | VEP_consequence | inframe_deletion | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | C34E10.5.2:c.53_61del | |||||||
HGVSp | CE29033:p.His19_Glu21del | |||||||
cDNA_position | 77-85 | |||||||
CDS_position | 53-61 | |||||||
Protein_position | 18-21 | |||||||
Exon_number | 2/12 | |||||||
Codon_change | cAGCATGAGGaa/caa | |||||||
Amino_acid_change | QHEE/Q | |||||||
Method | WGS_Flibotte |