WormBase Tree Display for Gene: WBGene00016408
expand all nodes | collapse all nodes | view schema
| WBGene00016408 | SMap | S_parent | Sequence | C34E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | prmt-5 | Person_evidence | WBPerson4055 | |||||
| Sequence_name | C34E10.5 | ||||||||
| Molecular_name | C34E10.5 | ||||||||
| C34E10.5.1 | |||||||||
| CE29033 | |||||||||
| C34E10.5.2 | |||||||||
| C34E10.5.3 | |||||||||
| Other_name | tag-251 | Person_evidence | WBPerson201 | ||||||
| CELE_C34E10.5 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | prmt-5 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 Jul 2007 11:50:19 | WBPerson2970 | Name_change | CGC_name | prmt-5 | ||||
| 3 | 20 Jul 2007 11:50:19 | WBPerson2970 | Name_change | Other_name | tag-251 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prmt | ||||||||
| Allele (48) | |||||||||
| Strain | WBStrain00036097 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (42) | |||||||||
| Contained_in_operon | CEOP3268 | ||||||||
| Ortholog (36) | |||||||||
| Structured_description | Automated_description | Enables DNA-binding transcription factor binding activity; p53 binding activity; and protein methyltransferase activity. Involved in several processes, including intrinsic apoptotic signaling pathway in response to DNA damage; negative regulation of DNA damage response, signal transduction by p53 class mediator; and response to odorant. Located in nucleus. Human ortholog(s) of this gene implicated in Leydig cell tumor and seminoma. Is an ortholog of human PRMT5 (protein arginine methyltransferase 5). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:2696 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10894) | ||||
| DOID:4440 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10894) | ||||||
| Molecular_info | Corresponding_CDS | C34E10.5 | |||||||
| Corresponding_transcript | C34E10.5.1 | ||||||||
| C34E10.5.2 | |||||||||
| C34E10.5.3 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf658920 | ||||||||
| WBsf224888 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Expr1018696 | ||||||||
| Expr1037030 | |||||||||
| Expr1145902 | |||||||||
| Expr2015099 | |||||||||
| Expr2033337 | |||||||||
| Drives_construct | WBCnstr00028094 | ||||||||
| Construct_product | WBCnstr00028094 | ||||||||
| Antibody | WBAntibody00002111 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction (111) | |||||||||
| Map_info | Map | III | Position | -1.87136 | Error | 0.010434 | |||
| Positive | Positive_clone | C34E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5207 | |||||||
| 4167 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (17) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
