WormBase Tree Display for Variation: WBVar02062190
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WBVar02062190 | Name | Public_name | WBVar02062190 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00791428 | |||||||
T16A9.3.1:c.-183-57_-135del | ||||||||
T16A9.3.3:c.-240_-135del | ||||||||
HGVSg | CHROMOSOME_V:g.14206163_14206268del | |||||||
Sequence_details | SMap | S_parent | Sequence | T16A9 | ||||
Flanking_sequences | TTCATTTCAAAATATGAGAAAATAAATATT | CCGTGCTTATTGTTCAATATGGCAGTGATC | ||||||
Mapping_target | T16A9 | |||||||
Source_location | 225 | CHROMOSOME_V | 14206148 | 14206253 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00011793 | ||||||
Transcript | T16A9.3.3 | VEP_consequence | 5_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T16A9.3.3:c.-240_-135del | |||||||
cDNA_position | 492-597 | |||||||
Exon_number | 1/9 | |||||||
T16A9.3.1 | VEP_consequence | splice_acceptor_variant,5_prime_UTR_variant,intron_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | T16A9.3.1:c.-183-57_-135del | |||||||
cDNA_position | ?-324 | |||||||
Intron_number | 1/9 | |||||||
Exon_number | 2/10 | |||||||
Method | WGS_Flibotte |