WormBase Tree Display for Gene: WBGene00011793
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| WBGene00011793 | SMap | S_parent | Sequence | T16A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T16A9.3 | |||||||
| Molecular_name | T16A9.3 | ||||||||
| T16A9.3.1 | |||||||||
| CE43662 | |||||||||
| T16A9.3.2 | |||||||||
| T16A9.3.3 | |||||||||
| Other_name | CELE_T16A9.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | T16A9.3 | ||||||||
| DB_info | Database | AceView | gene | 5O689 | |||||
| WormQTL | gene | WBGene00011793 | |||||||
| WormFlux | gene | WBGene00011793 | |||||||
| NDB | locus_tag | CELE_T16A9.3 | |||||||
| NCBI | gene | 188549 | |||||||
| RefSeq | protein | NM_074116.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316000 | |||||||
| TrEMBL | UniProtAcc | Q22522 | |||||||
| UniProt_GCRP | UniProtAcc | Q22522 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (62) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (23) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABaraapapaa; ABaraapppaa; XXX cell; rectal epithelial cell; and sensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; hsf-1; and clk-1 based on RNA-seq and microarray studies. Is affected by ten chemicals including rotenone; Sodium Chloride; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily; Protein of unknown function DUF1265; and Protein of unknown function (DUF1265). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T16A9.3 | |||||||
| Corresponding_CDS_history | T16A9.3:wp138 | ||||||||
| T16A9.3:wp201 | |||||||||
| Corresponding_transcript | T16A9.3.1 | ||||||||
| T16A9.3.2 | |||||||||
| T16A9.3.3 | |||||||||
| Other_sequence | FG647762.1 | ||||||||
| Associated_feature | WBsf662070 | ||||||||
| WBsf1001960 | |||||||||
| WBsf232892 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053404 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035604 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018760 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019251 | ||||||||
| Expr1156978 | |||||||||
| Expr2006205 | |||||||||
| Expr2024422 | |||||||||
| Drives_construct | WBCnstr00030382 | ||||||||
| Construct_product | WBCnstr00030382 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction | WBInteraction000151339 | ||||||||
| WBInteraction000175940 | |||||||||
| WBInteraction000213511 | |||||||||
| WBInteraction000262932 | |||||||||
| WBInteraction000263090 | |||||||||
| WBInteraction000266391 | |||||||||
| WBInteraction000366972 | |||||||||
| WBInteraction000392439 | |||||||||
| WBInteraction000399877 | |||||||||
| WBInteraction000567542 | |||||||||
| Map_info | Positive | Positive_clone | T16A9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.20027 | |||||||
| Method | Gene |
