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WormBase Tree Display for Variation: WBVar02042242

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Name Class

WBVar02042242NamePublic_nameWBVar02042242
Other_namecewivar00771352
C48D1.5f.1:c.466-1754del
C48D1.5d.1:c.598-1754del
JC8.17:n.416del
C48D1.5c.1:c.676-1754del
C48D1.5e.1:c.544-1754del
HGVSgCHROMOSOME_IV:g.13231035del
Sequence_detailsSMapS_parentSequenceJC8
Flanking_sequencesAACATTTTCAGTAAAAATCTATAAATATTTAAAAAAAAAGGATTTTTCGGTTAAAAAACA
Mapping_targetJC8
Source_location225CHROMOSOME_IV1323101113231011From_analysisMillion_mutation_project_reanalysis
Type_of_mutationDeletion
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00219548
WBGene00008178
TranscriptJC8.17VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScJC8.17:n.416del
cDNA_position416
Exon_number1/1
C48D1.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5e.1:c.544-1754del
Intron_number4/4
C48D1.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5c.1:c.676-1754del
Intron_number6/6
C48D1.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5f.1:c.466-1754del
Intron_number3/3
C48D1.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5d.1:c.598-1754del
Intron_number5/6
MethodWGS_Flibotte