WormBase Tree Display for Variation: WBVar02027052
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WBVar02027052 | Name | Public_name | WBVar02027052 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00755568 | |||||||
C42D8.5.1:c.*56del | ||||||||
HGVSg | CHROMOSOME_X:g.5092786del | |||||||
Sequence_details | SMap | S_parent | Sequence | C42D8 | ||||
Flanking_sequences | AGATTTCAGGTCAGGGAAACCTAAGGTTCT | AAAAAAAAAGAGTTTTTGAAAAATGGGAAA | ||||||
Mapping_target | C42D8 | |||||||
Source_location | 225 | CHROMOSOME_X | 5092755 | 5092755 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000039 | ||||||
Transcript | C42D8.5.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C42D8.5.1:c.*56del | |||||||
cDNA_position | 2777 | |||||||
Exon_number | 12/12 | |||||||
Method | WGS_Flibotte |