WormBase Tree Display for Variation: WBVar02026256
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WBVar02026256 | Name | Public_name | WBVar02026256 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00754770 | |||||||
F53H2.1c.1:c.672+89_672+127del | ||||||||
F53H2.1b.1:c.1893+89_1893+127del | ||||||||
F53H2.1a.1:c.2427+89_2427+127del | ||||||||
HGVSg | CHROMOSOME_V:g.20392484_20392522del | |||||||
Sequence_details | SMap | S_parent | Sequence | F53H2 | ||||
Flanking_sequences | AAGTATATCTTTTCACAGATCCTATTACAA | AGCTCTAACGTAACACGATGGCAAATTCAA | ||||||
Mapping_target | F53H2 | |||||||
Source_location | 225 | CHROMOSOME_V | 20392453 | 20392491 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010004 | ||||||
Transcript | F53H2.1a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53H2.1a.1:c.2427+89_2427+127del | |||||||
Intron_number | 20/21 | |||||||
F53H2.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53H2.1c.1:c.672+89_672+127del | |||||||
Intron_number | 4/5 | |||||||
F53H2.1b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F53H2.1b.1:c.1893+89_1893+127del | |||||||
Intron_number | 15/16 | |||||||
Method | WGS_Flibotte |