WormBase Tree Display for Variation: WBVar02012577
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WBVar02012577 | Name | Public_name | WBVar02012577 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00740993 | |||||||
W07B3.2b.2:c.-28+2356_-28+2407del | ||||||||
W07B3.2a.2:c.-28+2356_-28+2407del | ||||||||
W07B3.2d.1:c.-28+2356_-28+2407del | ||||||||
W07B3.3:n.35_86del | ||||||||
W07B3.2c.2:c.-28+2356_-28+2407del | ||||||||
HGVSg | CHROMOSOME_III:g.352256_352307del | |||||||
Sequence_details | SMap | S_parent | Sequence | W07B3 | ||||
Flanking_sequences | GGATGTTTTTAGTGGGGGATGGTGGAGAGA | GAGAGAGAGAGAGTGGTTACGGTTCCTTGA | ||||||
Mapping_target | W07B3 | |||||||
Source_location | 225 | CHROMOSOME_III | 352255 | 352306 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001561 | ||||||
WBGene00219745 | ||||||||
Transcript | W07B3.3 | VEP_consequence | non_coding_transcript_exon_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.3:n.35_86del | |||||||
cDNA_position | 35-86 | |||||||
Exon_number | 1/2 | |||||||
W07B3.2b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2b.2:c.-28+2356_-28+2407del | |||||||
Intron_number | 1/11 | |||||||
W07B3.2c.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2c.2:c.-28+2356_-28+2407del | |||||||
Intron_number | 1/10 | |||||||
W07B3.2a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2a.2:c.-28+2356_-28+2407del | |||||||
Intron_number | 1/10 | |||||||
W07B3.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | W07B3.2d.1:c.-28+2356_-28+2407del | |||||||
Intron_number | 1/10 | |||||||
Method | WGS_Flibotte |