WormBase Tree Display for Variation: WBVar01989426
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WBVar01989426 | Name | Public_name | WBVar01989426 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00716080 | |||||||
T27D12.2c.1:c.387-642del | ||||||||
T27D12.2a.1:c.186-642del | ||||||||
T27D12.2e.1:c.186-642del | ||||||||
T27D12.2d.1:c.201-642del | ||||||||
T27D12.2b.1:c.186-642del | ||||||||
HGVSg | CHROMOSOME_II:g.11851953del | |||||||
Sequence_details | SMap | S_parent | Sequence | T27D12 | ||||
Flanking_sequences | ACTGGAAGTCTAGTAAATTCCTATTTTCTA | TTTTCAGTACAAGGGCAATCCGGTATTATA | ||||||
Mapping_target | T27D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 11851890 | 11851890 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain (11) | ||||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000528 | ||||||
Transcript | T27D12.2b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T27D12.2b.1:c.186-642del | |||||||
Intron_number | 3/18 | |||||||
T27D12.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T27D12.2a.1:c.186-642del | |||||||
Intron_number | 3/18 | |||||||
T27D12.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T27D12.2c.1:c.387-642del | |||||||
Intron_number | 3/17 | |||||||
T27D12.2d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T27D12.2d.1:c.201-642del | |||||||
Intron_number | 1/15 | |||||||
T27D12.2e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T27D12.2e.1:c.186-642del | |||||||
Intron_number | 3/19 | |||||||
Method | WGS_Flibotte |