WormBase Tree Display for Variation: WBVar01983524
expand all nodes | collapse all nodes | view schema
WBVar01983524 | Name | Public_name | WBVar01983524 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00709810 | |||||||
T12B5.9:n.704_705insCAGTTTTCCA | ||||||||
T12B5.8.2:c.114-370_114-369insCAGTTTTCCA | ||||||||
T12B5.8.1:c.114-370_114-369insCAGTTTTCCA | ||||||||
HGVSg | CHROMOSOME_III:g.942126_942127insTGGAAAACTG | |||||||
Sequence_details | SMap | S_parent | Sequence | T12B5 | ||||
Flanking_sequences | GAAGGTGCAATGTCCGGCGAGTACAGTGGA | TGATTCAGCCGAGCTCCTGCAACTTGGCCT | ||||||
Mapping_target | T12B5 | |||||||
Source_location | 225 | CHROMOSOME_III | 942115 | 942116 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Insertion | TGGAAAACTG | ||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00023345 | ||||||
WBGene00020455 | ||||||||
Transcript | T12B5.8.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | T12B5.8.2:c.114-370_114-369insCAGTTTTCCA | |||||||
Intron_number | 2/6 | |||||||
T12B5.8.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T12B5.8.1:c.114-370_114-369insCAGTTTTCCA | |||||||
Intron_number | 2/5 | |||||||
Pseudogene | T12B5.9 | VEP_consequence | splice_region_variant,non_coding_transcript_exon_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T12B5.9:n.704_705insCAGTTTTCCA | |||||||
cDNA_position | 704-705 | |||||||
Exon_number | 6/7 | |||||||
Method | WGS_Flibotte |