WormBase Tree Display for Variation: WBVar01981445
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WBVar01981445 | Name | Public_name | WBVar01981445 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00707532 | |||||||
H20J18.1f.1:c.-98-5237_-98-5234del | ||||||||
H20J18.1c.1:c.305-5237_305-5234del | ||||||||
H20J18.1a.3:c.-98-5237_-98-5234del | ||||||||
HGVSg | CHROMOSOME_X:g.12519282_12519285del | |||||||
Sequence_details | SMap | S_parent | Sequence | C16D6 | ||||
Flanking_sequences | GCATTTCATCTATGTTGAGACTGTTAGAGA | GGGGGGGGGGCAAAACGTTTTCTTCGACAG | ||||||
Mapping_target | C16D6 | |||||||
Source_location | 225 | CHROMOSOME_X | 12519213 | 12519216 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004739 | ||||||
Transcript | H20J18.1a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1a.3:c.-98-5237_-98-5234del | |||||||
Intron_number | 1/14 | |||||||
H20J18.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1f.1:c.-98-5237_-98-5234del | |||||||
Intron_number | 1/14 | |||||||
H20J18.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1c.1:c.305-5237_305-5234del | |||||||
Intron_number | 1/12 | |||||||
Method | WGS_Flibotte |