WormBase Tree Display for Variation: WBVar01980035
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WBVar01980035 | Name | Public_name | WBVar01980035 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00706112 | |||||||
C33D12.2d.1:c.438+383del | ||||||||
C33D12.2b.1:c.438+383del | ||||||||
C33D12.2b.6:c.438+383del | ||||||||
C33D12.2b.3:c.438+383del | ||||||||
C33D12.2b.4:c.438+383del | ||||||||
C33D12.2a.1:c.2079+383del | ||||||||
C33D12.2b.2:c.438+383del | ||||||||
C33D12.2c.1:c.2079+383del | ||||||||
C33D12.2b.5:c.438+383del | ||||||||
HGVSg | CHROMOSOME_X:g.3038147del | |||||||
Sequence_details | SMap | S_parent | Sequence | M02F4 | ||||
Flanking_sequences | AAGCTTTTCTTGCATATTCATCAATTCCTG | TTTTTTTTTCAAAGCGATAAAACTGATTAT | ||||||
Mapping_target | M02F4 | |||||||
Source_location | 225 | CHROMOSOME_X | 3038137 | 3038137 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016343 | ||||||
Transcript | C33D12.2d.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2d.1:c.438+383del | |||||||
Intron_number | 2/4 | |||||||
C33D12.2c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2c.1:c.2079+383del | |||||||
Intron_number | 11/15 | |||||||
C33D12.2b.4 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2b.4:c.438+383del | |||||||
Intron_number | 11/14 | |||||||
C33D12.2b.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2b.3:c.438+383del | |||||||
Intron_number | 10/13 | |||||||
C33D12.2a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2a.1:c.2079+383del | |||||||
Intron_number | 12/15 | |||||||
C33D12.2b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2b.1:c.438+383del | |||||||
Intron_number | 12/15 | |||||||
C33D12.2b.6 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2b.6:c.438+383del | |||||||
Intron_number | 4/7 | |||||||
C33D12.2b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2b.2:c.438+383del | |||||||
Intron_number | 10/13 | |||||||
C33D12.2b.5 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C33D12.2b.5:c.438+383del | |||||||
Intron_number | 5/8 | |||||||
Method | WGS_Flibotte |