WormBase Tree Display for Variation: WBVar01978024
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WBVar01978024 | Name | Public_name | WBVar01978024 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00704092 | |||||||
F55C9.3.1:c.380del | ||||||||
CE18735:p.Leu127Ter | ||||||||
F55C9.3.2:c.380del | ||||||||
HGVSg | CHROMOSOME_V:g.19287133del | |||||||
Sequence_details | SMap | S_parent | Sequence | F55C9 | ||||
Flanking_sequences | AAGGTTAAGAAAGAACTTTTTTTGTGATTT | AAAAAAAAGGTGTTTCCACCGGTGATTTTG | ||||||
Mapping_target | F55C9 | |||||||
Source_location | 225 | CHROMOSOME_V | 19287104 | 19287104 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010100 | ||||||
Transcript | F55C9.3.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | F55C9.3.1:c.380del | |||||||
HGVSp | CE18735:p.Leu127Ter | |||||||
cDNA_position | 495 | |||||||
CDS_position | 380 | |||||||
Protein_position | 127 | |||||||
Exon_number | 5/5 | |||||||
Codon_change | tTa/ta | |||||||
Amino_acid_change | L/X | |||||||
F55C9.3.2 | VEP_consequence | frameshift_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | F55C9.3.2:c.380del | |||||||
HGVSp | CE18735:p.Leu127Ter | |||||||
cDNA_position | 465 | |||||||
CDS_position | 380 | |||||||
Protein_position | 127 | |||||||
Exon_number | 5/5 | |||||||
Codon_change | tTa/ta | |||||||
Amino_acid_change | L/X | |||||||
Method | WGS_Flibotte |