WormBase Tree Display for Variation: WBVar01968522
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WBVar01968522 | Name | Public_name | WBVar01968522 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00694486 | |||||||
Y57G11C.22a.1:c.101-3383_101-3382del | ||||||||
CE14964:p.Glu267AlafsTer3 | ||||||||
Y57G11C.20.1:c.798_799del | ||||||||
HGVSg | CHROMOSOME_IV:g.14844159_14844160del | |||||||
Sequence_details | SMap | S_parent | Sequence | Y57G11C | ||||
Flanking_sequences | AAACGAGGATCGTGAACGTGCCACGCAAAA | AGCGCCGTGAACACATTGAACGACATCGAC | ||||||
Mapping_target | Y57G11C | |||||||
Source_location | 225 | CHROMOSOME_IV | 14844127 | 14844128 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013315 | ||||||
WBGene00013317 | ||||||||
Transcript | Y57G11C.20.1 | VEP_consequence | frameshift_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | Y57G11C.20.1:c.798_799del | |||||||
HGVSp | CE14964:p.Glu267AlafsTer3 | |||||||
cDNA_position | 798-799 | |||||||
CDS_position | 798-799 | |||||||
Protein_position | 266-267 | |||||||
Exon_number | 1/1 | |||||||
Codon_change | aaAGag/aaag | |||||||
Amino_acid_change | KE/KX | |||||||
Y57G11C.22a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y57G11C.22a.1:c.101-3383_101-3382del | |||||||
Intron_number | 2/7 | |||||||
Method | WGS_Flibotte |