WormBase Tree Display for Variation: WBVar01960295
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WBVar01960295 | Name | Public_name | WBVar01960295 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00685366 | |||||||
F54D5.15c.1:c.442+385_442+387del | ||||||||
F54D5.15b.1:c.223+385_223+387del | ||||||||
F54D5.15b.2:c.223+385_223+387del | ||||||||
F54D5.15a.1:c.448+385_448+387del | ||||||||
F54D5.15b.3:c.223+385_223+387del | ||||||||
HGVSg | CHROMOSOME_II:g.11562123_11562125del | |||||||
Sequence_details | SMap | S_parent | Sequence | F54D5 | ||||
Flanking_sequences | AAGTATTTCTTTTTTTTATTTATTTCTTCT | TTTATCTTCTATAGTTTTATAATTCAAAAC | ||||||
Mapping_target | F54D5 | |||||||
Source_location | 225 | CHROMOSOME_II | 11562057 | 11562059 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00006622 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010057 | ||||||
Transcript | F54D5.15b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15b.1:c.223+385_223+387del | |||||||
Intron_number | 6/10 | |||||||
F54D5.15a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15a.1:c.448+385_448+387del | |||||||
Intron_number | 6/10 | |||||||
F54D5.15c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15c.1:c.442+385_442+387del | |||||||
Intron_number | 5/8 | |||||||
F54D5.15b.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15b.3:c.223+385_223+387del | |||||||
Intron_number | 4/8 | |||||||
F54D5.15b.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15b.2:c.223+385_223+387del | |||||||
Intron_number | 5/8 | |||||||
Method | WGS_Flibotte |