WormBase Tree Display for Gene: WBGene00010057
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| WBGene00010057 | SMap | S_parent | Sequence | F54D5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54D5.15 | |||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_F54D5.15 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54D5.15 | ||||||||
| DB_info | Database | AceView | gene | 2L850 | |||||
| WormQTL | gene | WBGene00010057 | |||||||
| WormFlux | gene | WBGene00010057 | |||||||
| NDB | locus_tag | CELE_F54D5.15 | |||||||
| NCBI | gene | 174770 | |||||||
| RefSeq | protein | NM_001381611.1 | |||||||
| NM_001381612.2 | |||||||||
| NM_001027028.4 | |||||||||
| TrEMBL | UniProtAcc | Q65ZB4 | |||||||
| Q65ZB5 | |||||||||
| Q9XVW8 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XVW8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (114) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Enriched in GABAergic neurons; MSaaaaapa; and pharyngeal muscle cell based on microarray and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by six chemicals including stavudine; Zidovudine; and Oligosaccharides based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D5.15a | |||||||
| F54D5.15b | |||||||||
| F54D5.15c | |||||||||
| Corresponding_CDS_history | F54D5.15:wp92 | ||||||||
| Corresponding_transcript | F54D5.15a.1 | ||||||||
| F54D5.15b.1 | |||||||||
| F54D5.15b.2 | |||||||||
| F54D5.15b.3 | |||||||||
| F54D5.15c.1 | |||||||||
| Other_sequence | SR03811 | ||||||||
| SR05190 | |||||||||
| CJC01370_1 | |||||||||
| CV198858.1 | |||||||||
| JI214650.1 | |||||||||
| SR03578 | |||||||||
| Oden_isotig20165 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000705 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015618 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048311 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032789 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024482 | ||||||||
| Expr1034388 | |||||||||
| Expr1152112 | |||||||||
| Expr2004149 | |||||||||
| Expr2022373 | |||||||||
| Drives_construct | WBCnstr00031703 | ||||||||
| Construct_product | WBCnstr00031703 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Positive | Positive_clone | F54D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 3.76074 | |||||||
| Method | Gene |
