WormBase Tree Display for Variation: WBVar01953979
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WBVar01953979 | Name | Public_name | WBVar01953979 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00676469 | |||||||
T12E12.4b.2:c.314-8del | ||||||||
T12E12.4b.1:c.314-8del | ||||||||
T12E12.4a.2:c.314-8del | ||||||||
T12E12.4a.1:c.314-8del | ||||||||
HGVSg | CHROMOSOME_IV:g.5538845del | |||||||
Sequence_details | SMap | S_parent | Sequence | T12E12 | ||||
Flanking_sequences | TAATTTGAATATTGCGAGAAATTTAAACAA | TTTCCAGACTTCGATGCCGTGCGAAAAGAA | ||||||
Mapping_target | T12E12 | |||||||
Source_location | 225 | CHROMOSOME_IV | 5538836 | 5538836 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001093 | ||||||
Transcript | T12E12.4b.2 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | T12E12.4b.2:c.314-8del | |||||||
Intron_number | 2/10 | |||||||
T12E12.4a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T12E12.4a.1:c.314-8del | |||||||
Intron_number | 1/8 | |||||||
T12E12.4b.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T12E12.4b.1:c.314-8del | |||||||
Intron_number | 2/9 | |||||||
T12E12.4a.2 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | T12E12.4a.2:c.314-8del | |||||||
Intron_number | 1/9 | |||||||
Method | WGS_Flibotte |