WormBase Tree Display for Variation: WBVar01945162
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WBVar01945162 | Name | Public_name | WBVar01945162 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00666684 | |||||||
F39C12.3b.1:c.199-276del | ||||||||
F39C12.3a.2:c.127-276del | ||||||||
F39C12.3a.1:c.127-276del | ||||||||
F39C12.3a.3:c.127-276del | ||||||||
HGVSg | CHROMOSOME_X:g.4869858del | |||||||
Sequence_details | SMap | S_parent | Sequence | F39C12 | ||||
Flanking_sequences | ACAAACACCGAAAAGGCAATTTGGATGAGA | GGGGGGGGGGGAAGGTGAAGCCTAACGCAC | ||||||
Mapping_target | F39C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 4869828 | 4869828 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006640 | ||||||
Transcript | F39C12.3a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.3a.3:c.127-276del | |||||||
Intron_number | 3/10 | |||||||
F39C12.3a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.3a.2:c.127-276del | |||||||
Intron_number | 2/9 | |||||||
F39C12.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.3a.1:c.127-276del | |||||||
Intron_number | 3/10 | |||||||
F39C12.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.3b.1:c.199-276del | |||||||
Intron_number | 3/9 | |||||||
Method | WGS_Flibotte |