WormBase Tree Display for Variation: WBVar01943619
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WBVar01943619 | Name | Public_name | WBVar01943619 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00664892 | |||||||
F54D5.15b.1:c.-192+87del | ||||||||
F54D5.15a.1:c.34+81del | ||||||||
F54D5.15c.1:c.28+87del | ||||||||
HGVSg | CHROMOSOME_II:g.11564039del | |||||||
Sequence_details | SMap | S_parent | Sequence | F54D5 | ||||
Flanking_sequences | TGCAATACCCCGGAAAATGGACGTTCCTAC | TTTTTTTTTTGAAAATATGTTATTATTAAT | ||||||
Mapping_target | F54D5 | |||||||
Source_location | 225 | CHROMOSOME_II | 11563973 | 11563973 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Deletion | |||||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010057 | ||||||
Transcript | F54D5.15b.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15b.1:c.-192+87del | |||||||
Intron_number | 1/10 | |||||||
F54D5.15a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15a.1:c.34+81del | |||||||
Intron_number | 2/10 | |||||||
F54D5.15c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F54D5.15c.1:c.28+87del | |||||||
Intron_number | 1/8 | |||||||
Method | WGS_Flibotte |