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WormBase Tree Display for Variation: WBVar01882986

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Name Class

WBVar01882986NamePublic_nameWBVar01882986
Other_namecewivar00597691
C54D1.3e.1:c.2751A>G
CE53282:p.Ser917=
CE53337:p.Ser827=
CE51697:p.Ser822=
C54D1.3d.1:c.2481A>G
C54D1.3b.1:c.2466A>G
CE37098:p.Ser732=
C54D1.3c.1:c.2196A>G
HGVSgCHROMOSOME_X:g.7137493A>G
Sequence_detailsSMapS_parentSequenceC54D1
Flanking_sequencesGGACGAGGATCTGATCTCAATTGACTTTTCAGATTAGGTAAAAATTCTGCATCAGATACA
Mapping_targetC54D1
Source_location225CHROMOSOME_X71374507137450From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002163
TranscriptC54D1.3e.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3e.1:c.2751A>G
HGVSpCE53282:p.Ser917=
cDNA_position2751
CDS_position2751
Protein_position917
Exon_number17/19
Codon_changetcA/tcG
Amino_acid_changeS
C54D1.3d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3d.1:c.2481A>G
HGVSpCE53337:p.Ser827=
cDNA_position2481
CDS_position2481
Protein_position827
Exon_number16/18
Codon_changetcA/tcG
Amino_acid_changeS
C54D1.3c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3c.1:c.2196A>G
HGVSpCE37098:p.Ser732=
cDNA_position2251
CDS_position2196
Protein_position732
Exon_number15/17
Codon_changetcA/tcG
Amino_acid_changeS
C54D1.3b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3b.1:c.2466A>G
HGVSpCE51697:p.Ser822=
cDNA_position2469
CDS_position2466
Protein_position822
Exon_number16/19
Codon_changetcA/tcG
Amino_acid_changeS
MethodWGS_Flibotte