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WormBase Tree Display for Variation: WBVar01872398

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Name Class

WBVar01872398NamePublic_nameWBVar01872398
Other_namecewivar00586668
Y40H4A.1a.3:c.1251C>T
Y40H4A.1a.2:c.1251C>T
CE27783:p.Asp417=
CE35800:p.Asp443=
Y40H4A.1b.1:c.1329C>T
Y40H4A.1a.1:c.1251C>T
HGVSgCHROMOSOME_V:g.14566688G>A
Sequence_detailsSMapS_parentSequenceC53A5
Flanking_sequencesACTTAATCGAACACTTGGACGGCTTCCTTCTCATTTAACTCAATCAAAACTGTATAGGTG
Mapping_targetC53A5
Source_location225CHROMOSOME_V1456667314566673From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023072From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00001519
TranscriptY40H4A.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.1:c.1251C>T
HGVSpCE27783:p.Asp417=
cDNA_position1396
CDS_position1251
Protein_position417
Exon_number9/13
Codon_changegaC/gaT
Amino_acid_changeD
Y40H4A.1b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1b.1:c.1329C>T
HGVSpCE35800:p.Asp443=
cDNA_position1329
CDS_position1329
Protein_position443
Exon_number7/11
Codon_changegaC/gaT
Amino_acid_changeD
Y40H4A.1a.3VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.3:c.1251C>T
HGVSpCE27783:p.Asp417=
cDNA_position1337
CDS_position1251
Protein_position417
Exon_number8/12
Codon_changegaC/gaT
Amino_acid_changeD
Y40H4A.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScY40H4A.1a.2:c.1251C>T
HGVSpCE27783:p.Asp417=
cDNA_position1270
CDS_position1251
Protein_position417
Exon_number7/11
Codon_changegaC/gaT
Amino_acid_changeD
MethodWGS_Flibotte