WormBase Tree Display for Variation: WBVar01872398
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WBVar01872398 | Name | Public_name | WBVar01872398 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00586668 | |||||||
Y40H4A.1a.3:c.1251C>T | ||||||||
Y40H4A.1a.2:c.1251C>T | ||||||||
CE27783:p.Asp417= | ||||||||
CE35800:p.Asp443= | ||||||||
Y40H4A.1b.1:c.1329C>T | ||||||||
Y40H4A.1a.1:c.1251C>T | ||||||||
HGVSg | CHROMOSOME_V:g.14566688G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C53A5 | ||||
Flanking_sequences | ACTTAATCGAACACTTGGACGGCTTCCTTC | TCATTTAACTCAATCAAAACTGTATAGGTG | ||||||
Mapping_target | C53A5 | |||||||
Source_location | 225 | CHROMOSOME_V | 14566673 | 14566673 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00001519 | ||||||
Transcript | Y40H4A.1a.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.1:c.1251C>T | |||||||
HGVSp | CE27783:p.Asp417= | |||||||
cDNA_position | 1396 | |||||||
CDS_position | 1251 | |||||||
Protein_position | 417 | |||||||
Exon_number | 9/13 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Y40H4A.1b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1b.1:c.1329C>T | |||||||
HGVSp | CE35800:p.Asp443= | |||||||
cDNA_position | 1329 | |||||||
CDS_position | 1329 | |||||||
Protein_position | 443 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Y40H4A.1a.3 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.3:c.1251C>T | |||||||
HGVSp | CE27783:p.Asp417= | |||||||
cDNA_position | 1337 | |||||||
CDS_position | 1251 | |||||||
Protein_position | 417 | |||||||
Exon_number | 8/12 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Y40H4A.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y40H4A.1a.2:c.1251C>T | |||||||
HGVSp | CE27783:p.Asp417= | |||||||
cDNA_position | 1270 | |||||||
CDS_position | 1251 | |||||||
Protein_position | 417 | |||||||
Exon_number | 7/11 | |||||||
Codon_change | gaC/gaT | |||||||
Amino_acid_change | D | |||||||
Method | WGS_Flibotte |