WormBase Tree Display for Variation: WBVar01872036
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WBVar01872036 | Name | Public_name | WBVar01872036 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00586280 | |||||||
R02D5.3.1:c.*10A>T | ||||||||
R02D5.4.1:c.*105T>A | ||||||||
HGVSg | CHROMOSOME_V:g.14484227A>T | |||||||
Sequence_details | SMap | S_parent | Sequence | R02D5 | ||||
Flanking_sequences | TATTCAATGGTTGATCATTAATTAAACTGT | TTTAATTCTTCATTTATTTACTTCTTTTTG | ||||||
Mapping_target | R02D5 | |||||||
Source_location | 225 | CHROMOSOME_V | 14484212 | 14484212 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00010978 | ||||||
WBGene00010977 | ||||||||
Transcript | R02D5.4.1 | VEP_consequence | 3_prime_UTR_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R02D5.4.1:c.*105T>A | |||||||
cDNA_position | 404 | |||||||
Exon_number | 4/4 | |||||||
R02D5.3.1 | VEP_consequence | 3_prime_UTR_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | R02D5.3.1:c.*10A>T | |||||||
cDNA_position | 787 | |||||||
Exon_number | 4/4 | |||||||
Method | WGS_Flibotte |