WormBase Tree Display for Variation: WBVar01860718
expand all nodes | collapse all nodes | view schema
WBVar01860718 | Name | Public_name | WBVar01860718 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00574287 | |||||||
C49G7.10a.1:c.45A>T | ||||||||
CE42293:p.Glu15Asp | ||||||||
HGVSg | CHROMOSOME_V:g.4041406T>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C49G7 | ||||
Flanking_sequences | GAGTGCATTTCTGTCATGGTTTTTTTCAGT | TCCGGGCGGCCATTTTTTGTCCTGGAAAAT | ||||||
Mapping_target | C49G7 | |||||||
Source_location | 225 | CHROMOSOME_V | 4041391 | 4041391 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016788 | ||||||
Transcript | C49G7.10a.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 1 | tolerated | ||||||
PolyPhen | 0.026 | benign | ||||||
HGVSc | C49G7.10a.1:c.45A>T | |||||||
HGVSp | CE42293:p.Glu15Asp | |||||||
cDNA_position | 75 | |||||||
CDS_position | 45 | |||||||
Protein_position | 15 | |||||||
Exon_number | 3/6 | |||||||
Codon_change | gaA/gaT | |||||||
Amino_acid_change | E/D | |||||||
Method | WGS_Flibotte |