WormBase Tree Display for Variation: WBVar01859541
expand all nodes | collapse all nodes | view schema
WBVar01859541 | Name | Public_name | WBVar01859541 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00573058 | |||||||
C25G4.1.1:c.1132G>C | ||||||||
CE49919:p.Val378Leu | ||||||||
HGVSg | CHROMOSOME_IV:g.12440526G>C | |||||||
Sequence_details | SMap | S_parent | Sequence | C25G4 | ||||
Flanking_sequences | ACAATTACTACATCGACTGTCAAAACTACC | TCCCAGGGACCTGTACTCCCACTTGCCCAA | ||||||
Mapping_target | C25G4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 12440503 | 12440503 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | C | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00007729 | ||||||
Transcript | C25G4.1.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.08 | tolerated_low_confidence | ||||||
PolyPhen | 0 | unknown | ||||||
HGVSc | C25G4.1.1:c.1132G>C | |||||||
HGVSp | CE49919:p.Val378Leu | |||||||
cDNA_position | 1152 | |||||||
CDS_position | 1132 | |||||||
Protein_position | 378 | |||||||
Exon_number | 6/9 | |||||||
Codon_change | Gtc/Ctc | |||||||
Amino_acid_change | V/L | |||||||
Method | WGS_Flibotte |