WormBase Tree Display for Variation: WBVar01848883

WBVar01848883 Name: Public_name: WBVar01848883
    Other_name: cewivar00561809
      F22A3.3b.1:c.162T>C
      CE52723:p.Phe54=
      F22A3.3a.1:c.-13T>C
    HGVSg: CHROMOSOME_X:g.6506871T>C
  Sequence_details: SMap: S_parent: Sequence: C15B12
    Flanking_sequences: ATTTTTCCAGCTCAGCAATGAAAAACACTT TCGCTTTCCGAAATGAAAGGAAGAACTTTA
    Mapping_target: C15B12
    Source_location: 225 CHROMOSOME_X 6506834 6506834 From_analysis: Million_mutation_project_reanalysis
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
    Laboratory: VC
    Analysis: Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00001619
    Transcript: F22A3.3a.1 VEP_consequence: 5_prime_UTR_variant
        VEP_impact: MODIFIER
        HGVSc: F22A3.3a.1:c.-13T>C
        cDNA_position: 458
        Exon_number: 3/14
      F22A3.3b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: F22A3.3b.1:c.162T>C
        HGVSp: CE52723:p.Phe54=
        cDNA_position: 162
        CDS_position: 162
        Protein_position: 54
        Exon_number: 3/12
        Codon_change: ttT/ttC
        Amino_acid_change: F
  Method: WGS_Flibotte