WormBase Tree Display for Variation: WBVar01842547
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WBVar01842547 | Name | Public_name | WBVar01842547 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00555199 | |||||||
CE35523:p.Gly275Ser | ||||||||
F35E12.6.1:c.823G>A | ||||||||
F35E12.6.2:c.823G>A | ||||||||
HGVSg | CHROMOSOME_V:g.13734776C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F35E12 | ||||
Flanking_sequences | TCAGAGTTTTGATGTTAATACTGGAGCAAC | ATCACAAATGACAGTAAAGTATGCATCAGC | ||||||
Mapping_target | F35E12 | |||||||
Source_location | 225 | CHROMOSOME_V | 13734763 | 13734763 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009430 | ||||||
Transcript | F35E12.6.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
SIFT | 0.39 | tolerated | ||||||
PolyPhen | 0.91 | possibly_damaging | ||||||
HGVSc | F35E12.6.1:c.823G>A | |||||||
HGVSp | CE35523:p.Gly275Ser | |||||||
cDNA_position | 826 | |||||||
CDS_position | 823 | |||||||
Protein_position | 275 | |||||||
Exon_number | 8/11 | |||||||
Codon_change | Ggt/Agt | |||||||
Amino_acid_change | G/S | |||||||
F35E12.6.2 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
SIFT | 0.39 | tolerated | ||||||
PolyPhen | 0.91 | possibly_damaging | ||||||
HGVSc | F35E12.6.2:c.823G>A | |||||||
HGVSp | CE35523:p.Gly275Ser | |||||||
cDNA_position | 863 | |||||||
CDS_position | 823 | |||||||
Protein_position | 275 | |||||||
Exon_number | 9/12 | |||||||
Codon_change | Ggt/Agt | |||||||
Amino_acid_change | G/S | |||||||
Method | WGS_Flibotte |