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WormBase Tree Display for Variation: WBVar01831823

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Name Class

WBVar01831823NamePublic_nameWBVar01831823
Other_namecewivar00544030
F08B4.2c.1:c.3447G>A
CE52337:p.Lys1149=
CE52236:p.Lys1149=
F08B4.2a.1:c.3447G>A
CE49688:p.Lys1006=
F08B4.2d.1:c.3018G>A
F08B4.2b.1:c.3018G>A
CE29253:p.Lys1006=
HGVSgCHROMOSOME_IV:g.8674424G>A
Sequence_detailsSMapS_parentSequenceF08B4
Flanking_sequencesGAATGTGATTGGTTCAACTAACAGATTCAAATGATTATTTATGGATTGAACCCACAACAA
Mapping_targetF08B4
Source_location225CHROMOSOME_IV86744118674411From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022887From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000397
TranscriptF08B4.2c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF08B4.2c.1:c.3447G>A
HGVSpCE52337:p.Lys1149=
cDNA_position3447
CDS_position3447
Protein_position1149
Exon_number18/24
Codon_changeaaG/aaA
Amino_acid_changeK
F08B4.2d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF08B4.2d.1:c.3018G>A
HGVSpCE49688:p.Lys1006=
cDNA_position3222
CDS_position3018
Protein_position1006
Exon_number18/24
Codon_changeaaG/aaA
Amino_acid_changeK
F08B4.2a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF08B4.2a.1:c.3447G>A
HGVSpCE52236:p.Lys1149=
cDNA_position3654
CDS_position3447
Protein_position1149
Exon_number19/24
Codon_changeaaG/aaA
Amino_acid_changeK
F08B4.2b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF08B4.2b.1:c.3018G>A
HGVSpCE29253:p.Lys1006=
cDNA_position3143
CDS_position3018
Protein_position1006
Exon_number18/23
Codon_changeaaG/aaA
Amino_acid_changeK
MethodWGS_Flibotte