WormBase Tree Display for Variation: WBVar01826131
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WBVar01826131 | Name | Public_name | WBVar01826131 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00538079 | |||||||
CE21327:p.Asn116= | ||||||||
Y7A5A.2.1:c.348C>T | ||||||||
HGVSg | CHROMOSOME_X:g.15771960G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | Y7A5A | ||||
Flanking_sequences | TTAACCAATAGGTTTTATCCCATAACTTAC | TTCATTTCTAGAGAATTTAGCATTCTCAGA | ||||||
Mapping_target | Y7A5A | |||||||
Source_location | 225 | CHROMOSOME_X | 15771892 | 15771892 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00012408 | ||||||
Transcript | Y7A5A.2.1 | VEP_consequence | splice_region_variant,synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y7A5A.2.1:c.348C>T | |||||||
HGVSp | CE21327:p.Asn116= | |||||||
cDNA_position | 354 | |||||||
CDS_position | 348 | |||||||
Protein_position | 116 | |||||||
Exon_number | 4/6 | |||||||
Codon_change | aaC/aaT | |||||||
Amino_acid_change | N | |||||||
Method | WGS_Flibotte |