WormBase Tree Display for Variation: WBVar01825236
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WBVar01825236 | Name | Public_name | WBVar01825236 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00537141 | |||||||
T10A3.1e.1:c.3940+2T>C | ||||||||
T10A3.1a.1:c.4357+2T>C | ||||||||
T10A3.1f.1:c.3934+2T>C | ||||||||
T10A3.1d.1:c.4249+2T>C | ||||||||
T10A3.1c.1:c.4255+2T>C | ||||||||
T10A3.1b.1:c.*182+2T>C | ||||||||
HGVSg | CHROMOSOME_X:g.7272983A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | T10A3 | ||||
Flanking_sequences | ATATGAAGCTATATCTTCAACATCAACAAT | CCTGGACAAACTTTCACTCCCGGTTTTACT | ||||||
Mapping_target | T10A3 | |||||||
Source_location | 225 | CHROMOSOME_X | 7272938 | 7272938 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006750 | ||||||
Transcript | T10A3.1c.1 | VEP_consequence | splice_donor_variant | |||||
VEP_impact | HIGH | |||||||
HGVSc | T10A3.1c.1:c.4255+2T>C | |||||||
Intron_number | 26/28 | |||||||
T10A3.1d.1 | VEP_consequence | splice_donor_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | T10A3.1d.1:c.4249+2T>C | |||||||
Intron_number | 26/27 | |||||||
T10A3.1e.1 | VEP_consequence | splice_donor_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | T10A3.1e.1:c.3940+2T>C | |||||||
Intron_number | 25/27 | |||||||
T10A3.1b.1 | VEP_consequence | splice_donor_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | T10A3.1b.1:c.*182+2T>C | |||||||
Intron_number | 26/27 | |||||||
T10A3.1a.1 | VEP_consequence | splice_donor_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | T10A3.1a.1:c.4357+2T>C | |||||||
Intron_number | 25/27 | |||||||
T10A3.1f.1 | VEP_consequence | splice_donor_variant | ||||||
VEP_impact | HIGH | |||||||
HGVSc | T10A3.1f.1:c.3934+2T>C | |||||||
Intron_number | 25/26 | |||||||
Method | WGS_Flibotte |