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WormBase Tree Display for Variation: WBVar01825236

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Name Class

WBVar01825236NamePublic_nameWBVar01825236
Other_namecewivar00537141
T10A3.1e.1:c.3940+2T>C
T10A3.1a.1:c.4357+2T>C
T10A3.1f.1:c.3934+2T>C
T10A3.1d.1:c.4249+2T>C
T10A3.1c.1:c.4255+2T>C
T10A3.1b.1:c.*182+2T>C
HGVSgCHROMOSOME_X:g.7272983A>G
Sequence_detailsSMapS_parentSequenceT10A3
Flanking_sequencesATATGAAGCTATATCTTCAACATCAACAATCCTGGACAAACTTTCACTCCCGGTTTTACT
Mapping_targetT10A3
Source_location225CHROMOSOME_X72729387272938From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022878From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00006750
TranscriptT10A3.1c.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScT10A3.1c.1:c.4255+2T>C
Intron_number26/28
T10A3.1d.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScT10A3.1d.1:c.4249+2T>C
Intron_number26/27
T10A3.1e.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScT10A3.1e.1:c.3940+2T>C
Intron_number25/27
T10A3.1b.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScT10A3.1b.1:c.*182+2T>C
Intron_number26/27
T10A3.1a.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScT10A3.1a.1:c.4357+2T>C
Intron_number25/27
T10A3.1f.1VEP_consequencesplice_donor_variant
VEP_impactHIGH
HGVScT10A3.1f.1:c.3934+2T>C
Intron_number25/26
MethodWGS_Flibotte