WormBase Tree Display for Variation: WBVar01822435
expand all nodes | collapse all nodes | view schema
WBVar01822435 | Name | Public_name | WBVar01822435 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00534203 | |||||||
CE07153:p.Tyr181= | ||||||||
F28B4.3.1:c.543T>C | ||||||||
HGVSg | CHROMOSOME_X:g.3234770A>G | |||||||
Sequence_details | SMap | S_parent | Sequence | F40F4 | ||||
Flanking_sequences | GAGAAGATACTGGCCTGGCGCTAAAGTCTC | TATGTTGCCACATAGGAAGTTACGGTTTTT | ||||||
Mapping_target | F40F4 | |||||||
Source_location | 225 | CHROMOSOME_X | 3234758 | 3234758 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | A | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022868 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00017892 | ||||||
Transcript | F28B4.3.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F28B4.3.1:c.543T>C | |||||||
HGVSp | CE07153:p.Tyr181= | |||||||
cDNA_position | 545 | |||||||
CDS_position | 543 | |||||||
Protein_position | 181 | |||||||
Exon_number | 4/25 | |||||||
Codon_change | taT/taC | |||||||
Amino_acid_change | Y | |||||||
Method | WGS_Flibotte |