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WormBase Tree Display for Variation: WBVar01820213

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Name Class

WBVar01820213NamePublic_nameWBVar01820213
Other_namecewivar00531860
C54D1.3b.1:c.372G>A
CE53282:p.Ala124=
C54D1.3e.1:c.372G>A
C54D1.3d.1:c.102G>A
C54D1.3c.1:c.102G>A
CE53337:p.Ala34=
CE37098:p.Ala34=
CE51697:p.Ala124=
HGVSgCHROMOSOME_X:g.7132308G>A
Sequence_detailsSMapS_parentSequenceC54D1
Flanking_sequencesCACGGAAGAGAAGAAACAAGAAACGATTGCCCAAAACAGGAAGAAACTGTAAAGAAATGT
Mapping_targetC54D1
Source_location225CHROMOSOME_X71322657132265From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00002163
TranscriptC54D1.3e.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3e.1:c.372G>A
HGVSpCE53282:p.Ala124=
cDNA_position372
CDS_position372
Protein_position124
Exon_number2/19
Codon_changegcG/gcA
Amino_acid_changeA
C54D1.3d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3d.1:c.102G>A
HGVSpCE53337:p.Ala34=
cDNA_position102
CDS_position102
Protein_position34
Exon_number1/18
Codon_changegcG/gcA
Amino_acid_changeA
C54D1.3c.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3c.1:c.102G>A
HGVSpCE37098:p.Ala34=
cDNA_position157
CDS_position102
Protein_position34
Exon_number2/17
Codon_changegcG/gcA
Amino_acid_changeA
C54D1.3b.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScC54D1.3b.1:c.372G>A
HGVSpCE51697:p.Ala124=
cDNA_position375
CDS_position372
Protein_position124
Exon_number3/19
Codon_changegcG/gcA
Amino_acid_changeA
MethodWGS_Flibotte