WormBase Tree Display for Variation: WBVar01820213
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WBVar01820213 | Name | Public_name | WBVar01820213 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00531860 | |||||||
C54D1.3b.1:c.372G>A | ||||||||
CE53282:p.Ala124= | ||||||||
C54D1.3e.1:c.372G>A | ||||||||
C54D1.3d.1:c.102G>A | ||||||||
C54D1.3c.1:c.102G>A | ||||||||
CE53337:p.Ala34= | ||||||||
CE37098:p.Ala34= | ||||||||
CE51697:p.Ala124= | ||||||||
HGVSg | CHROMOSOME_X:g.7132308G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C54D1 | ||||
Flanking_sequences | CACGGAAGAGAAGAAACAAGAAACGATTGC | CCAAAACAGGAAGAAACTGTAAAGAAATGT | ||||||
Mapping_target | C54D1 | |||||||
Source_location | 225 | CHROMOSOME_X | 7132265 | 7132265 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00002163 | ||||||
Transcript | C54D1.3e.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C54D1.3e.1:c.372G>A | |||||||
HGVSp | CE53282:p.Ala124= | |||||||
cDNA_position | 372 | |||||||
CDS_position | 372 | |||||||
Protein_position | 124 | |||||||
Exon_number | 2/19 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
C54D1.3d.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C54D1.3d.1:c.102G>A | |||||||
HGVSp | CE53337:p.Ala34= | |||||||
cDNA_position | 102 | |||||||
CDS_position | 102 | |||||||
Protein_position | 34 | |||||||
Exon_number | 1/18 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
C54D1.3c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C54D1.3c.1:c.102G>A | |||||||
HGVSp | CE37098:p.Ala34= | |||||||
cDNA_position | 157 | |||||||
CDS_position | 102 | |||||||
Protein_position | 34 | |||||||
Exon_number | 2/17 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
C54D1.3b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C54D1.3b.1:c.372G>A | |||||||
HGVSp | CE51697:p.Ala124= | |||||||
cDNA_position | 375 | |||||||
CDS_position | 372 | |||||||
Protein_position | 124 | |||||||
Exon_number | 3/19 | |||||||
Codon_change | gcG/gcA | |||||||
Amino_acid_change | A | |||||||
Method | WGS_Flibotte |