WormBase Tree Display for Variation: WBVar01819579
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WBVar01819579 | Name | Public_name | WBVar01819579 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00531182 | |||||||
F39C12.3a.1:c.-38+1026G>A | ||||||||
F39C12.3a.3:c.-37-2288G>A | ||||||||
F39C12.3b.1:c.35+1026G>A | ||||||||
HGVSg | CHROMOSOME_X:g.4873347C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F39C12 | ||||
Flanking_sequences | AAAAAATAATAAATCGGTTTTTCTTTTTAT | TTGTGCCTATTGAAACAAGGTAACAATCAT | ||||||
Mapping_target | F39C12 | |||||||
Source_location | 225 | CHROMOSOME_X | 4873317 | 4873317 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022902 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006640 | ||||||
Transcript | F39C12.3a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.3a.3:c.-37-2288G>A | |||||||
Intron_number | 1/10 | |||||||
F39C12.3a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.3a.1:c.-38+1026G>A | |||||||
Intron_number | 1/10 | |||||||
F39C12.3b.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | F39C12.3b.1:c.35+1026G>A | |||||||
Intron_number | 2/9 | |||||||
Method | WGS_Flibotte |