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WormBase Tree Display for Variation: WBVar01816087

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Name Class

WBVar01816087NamePublic_nameWBVar01816087
Other_namecewivar00527486
C54D2.5a.1:c.-77+1516A>G
C54D2.5a.2:c.-77+1424A>G
HGVSgCHROMOSOME_X:g.7874387T>C
Sequence_detailsSMapS_parentSequenceC39D10
Flanking_sequencesTTTTCTGCACTTTTAAGGCATGTGAGCATTATATCAGGTGTTAGCATCAGATGTCGTATT
Mapping_targetC39D10
Source_location225CHROMOSOME_X78743397874339From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022850From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.-77+1516A>G
Intron_number1/31
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.-77+1424A>G
Intron_number2/32
MethodWGS_Flibotte