WormBase Tree Display for Variation: WBVar01798330
expand all nodes | collapse all nodes | view schema
WBVar01798330 | Name | Public_name | WBVar01798330 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00500932 | |||||||
Y105C5A.17b.1:n.120-221C>G | ||||||||
Y105C5A.17a.1:n.66-221C>G | ||||||||
Y105C5A.17c.1:n.120-221C>G | ||||||||
HGVSg | CHROMOSOME_IV:g.15725457C>G | |||||||
Sequence_details | SMap | S_parent | Sequence | Y105C5A | ||||
Flanking_sequences | TTTTTAAATAATAGAACATAGTAGATTTTT | TTTTAAAAACGCTGAAAATGAATTTGATTA | ||||||
Mapping_target | Y105C5A | |||||||
Source_location | 225 | CHROMOSOME_IV | 15725425 | 15725425 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022899 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00013640 | ||||||
Transcript | Y105C5A.17a | VEP_consequence | intron_variant,non_coding_transcript_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y105C5A.17a.1:n.66-221C>G | |||||||
Intron_number | 1/3 | |||||||
Y105C5A.17b | VEP_consequence | intron_variant,non_coding_transcript_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y105C5A.17b.1:n.120-221C>G | |||||||
Intron_number | 2/4 | |||||||
Y105C5A.17c | VEP_consequence | intron_variant,non_coding_transcript_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | Y105C5A.17c.1:n.120-221C>G | |||||||
Intron_number | 2/5 | |||||||
Method | WGS_Flibotte |