WormBase Tree Display for Variation: WBVar01794943
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WBVar01794943 | Name | Public_name | WBVar01794943 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00497333 | |||||||
CE49688:p.Pro516Ser | ||||||||
F08B4.2d.1:c.1546C>T | ||||||||
CE29253:p.Pro516Ser | ||||||||
F08B4.2a.1:c.1546C>T | ||||||||
F08B4.2c.1:c.1546C>T | ||||||||
F08B4.2b.1:c.1546C>T | ||||||||
CE52236:p.Pro516Ser | ||||||||
CE52337:p.Pro516Ser | ||||||||
HGVSg | CHROMOSOME_IV:g.8671231C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F08B4 | ||||
Flanking_sequences | GCTCCAGTGGAACCTGAGTTTCCACAATTC | CAACATTCCCCACACTCAGTCCACATCCTC | ||||||
Mapping_target | F08B4 | |||||||
Source_location | 225 | CHROMOSOME_IV | 8671218 | 8671218 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000397 | ||||||
Transcript | F08B4.2c.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | F08B4.2c.1:c.1546C>T | |||||||
HGVSp | CE52337:p.Pro516Ser | |||||||
cDNA_position | 1546 | |||||||
CDS_position | 1546 | |||||||
Protein_position | 516 | |||||||
Exon_number | 8/24 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
F08B4.2d.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F08B4.2d.1:c.1546C>T | |||||||
HGVSp | CE49688:p.Pro516Ser | |||||||
cDNA_position | 1750 | |||||||
CDS_position | 1546 | |||||||
Protein_position | 516 | |||||||
Exon_number | 9/24 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
F08B4.2a.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F08B4.2a.1:c.1546C>T | |||||||
HGVSp | CE52236:p.Pro516Ser | |||||||
cDNA_position | 1753 | |||||||
CDS_position | 1546 | |||||||
Protein_position | 516 | |||||||
Exon_number | 9/24 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
F08B4.2b.1 | VEP_consequence | missense_variant | ||||||
VEP_impact | MODERATE | |||||||
HGVSc | F08B4.2b.1:c.1546C>T | |||||||
HGVSp | CE29253:p.Pro516Ser | |||||||
cDNA_position | 1671 | |||||||
CDS_position | 1546 | |||||||
Protein_position | 516 | |||||||
Exon_number | 9/23 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
Method | WGS_Flibotte |