WormBase Tree Display for Variation: WBVar01787283
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WBVar01787283 | Name | Public_name | WBVar01787283 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00489200 | |||||||
C16D6.4:n.1662G>A | ||||||||
H20J18.1c.1:c.305-3325G>A | ||||||||
H20J18.1a.3:c.-98-3325G>A | ||||||||
H20J18.1f.1:c.-98-3325G>A | ||||||||
HGVSg | CHROMOSOME_X:g.12517373C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C16D6 | ||||
Flanking_sequences | ATCCAAGAAATCAAAAGCGTCTTTCTTCCG | CTTCTGTTTTTCTTTTCTCCACGCTTCTCT | ||||||
Mapping_target | C16D6 | |||||||
Source_location | 225 | CHROMOSOME_X | 12517304 | 12517304 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004739 | ||||||
WBGene00219561 | ||||||||
Transcript | H20J18.1a.3 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1a.3:c.-98-3325G>A | |||||||
Intron_number | 1/14 | |||||||
H20J18.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1f.1:c.-98-3325G>A | |||||||
Intron_number | 1/14 | |||||||
C16D6.4 | VEP_consequence | non_coding_transcript_exon_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C16D6.4:n.1662G>A | |||||||
cDNA_position | 1662 | |||||||
Exon_number | 1/1 | |||||||
H20J18.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1c.1:c.305-3325G>A | |||||||
Intron_number | 1/12 | |||||||
Method | WGS_Flibotte |