WormBase Tree Display for Variation: WBVar01787278
expand all nodes | collapse all nodes | view schema
WBVar01787278 | Name | Public_name | WBVar01787278 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00489194 | |||||||
H20J18.1c.1:c.400+60A>C | ||||||||
H20J18.1a.3:c.-3+60A>C | ||||||||
H20J18.1a.1:c.-3+60A>C | ||||||||
H20J18.1h.1:c.-3+60A>C | ||||||||
H20J18.1f.1:c.-3+60A>C | ||||||||
H20J18.1f.2:c.-3+60A>C | ||||||||
HGVSg | CHROMOSOME_X:g.12513893T>G | |||||||
Sequence_details | SMap | S_parent | Sequence | C16D6 | ||||
Flanking_sequences | CATTTTAGATCAATTAGCAGAAAAGTTTCT | GCAATTAAAAATTTTTTTAACGTCAAGCTA | ||||||
Mapping_target | C16D6 | |||||||
Source_location | 225 | CHROMOSOME_X | 12513824 | 12513824 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | T | G | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004739 | ||||||
Transcript | H20J18.1f.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1f.2:c.-3+60A>C | |||||||
Intron_number | 1/13 | |||||||
H20J18.1a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1a.3:c.-3+60A>C | |||||||
Intron_number | 2/14 | |||||||
H20J18.1h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1h.1:c.-3+60A>C | |||||||
Intron_number | 1/12 | |||||||
H20J18.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1a.1:c.-3+60A>C | |||||||
Intron_number | 1/13 | |||||||
H20J18.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1f.1:c.-3+60A>C | |||||||
Intron_number | 2/14 | |||||||
H20J18.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1c.1:c.400+60A>C | |||||||
Intron_number | 2/12 | |||||||
Method | WGS_Flibotte |