WormBase Tree Display for Variation: WBVar01787272
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WBVar01787272 | Name | Public_name | WBVar01787272 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00489187 | |||||||
H20J18.1f.2:c.-2-2012C>T | ||||||||
H20J18.1f.1:c.-2-2012C>T | ||||||||
H20J18.1c.1:c.401-2012C>T | ||||||||
H20J18.1a.3:c.-2-2012C>T | ||||||||
H20J18.1h.1:c.-2-2012C>T | ||||||||
H20J18.1a.1:c.-2-2012C>T | ||||||||
HGVSg | CHROMOSOME_X:g.12511231G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | H20J18 | ||||
Flanking_sequences | ATGTTTTTTGTATTGCTCTAGAAATATGAG | CATGTACATCTATAAAAGACAAAAAATAAT | ||||||
Mapping_target | H20J18 | |||||||
Source_location | 225 | CHROMOSOME_X | 12511162 | 12511162 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022883 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022886 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022887 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00004739 | ||||||
Transcript | H20J18.1f.2 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1f.2:c.-2-2012C>T | |||||||
Intron_number | 1/13 | |||||||
H20J18.1a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1a.3:c.-2-2012C>T | |||||||
Intron_number | 2/14 | |||||||
H20J18.1h.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1h.1:c.-2-2012C>T | |||||||
Intron_number | 1/12 | |||||||
H20J18.1a.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1a.1:c.-2-2012C>T | |||||||
Intron_number | 1/13 | |||||||
H20J18.1f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1f.1:c.-2-2012C>T | |||||||
Intron_number | 2/14 | |||||||
H20J18.1c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | H20J18.1c.1:c.401-2012C>T | |||||||
Intron_number | 2/12 | |||||||
Method | WGS_Flibotte |