WormBase Tree Display for Variation: WBVar01782312
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WBVar01782312 | Name | Public_name | WBVar01782312 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00483149 | |||||||
C54D2.5c.1:c.4250-53C>T | ||||||||
C54D2.5a.3:c.4250-98C>T | ||||||||
C54D2.5g.1:c.4271-53C>T | ||||||||
C54D2.5e.1:c.4271-98C>T | ||||||||
C54D2.5a.2:c.4250-98C>T | ||||||||
C54D2.5a.1:c.4250-98C>T | ||||||||
C54D2.5d.1:c.4394-98C>T | ||||||||
HGVSg | CHROMOSOME_X:g.7851293G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C54D2 | ||||
Flanking_sequences | AGTGTAGCACAACAAGACGGTAGGAGAGGG | GAATATTTTGGGGAGAATTTTGATGATTGC | ||||||
Mapping_target | C54D2 | |||||||
Source_location | 225 | CHROMOSOME_X | 7851243 | 7851243 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000367 | ||||||
Transcript | C54D2.5a.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.1:c.4250-98C>T | |||||||
Intron_number | 24/31 | |||||||
C54D2.5g.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5g.1:c.4271-53C>T | |||||||
Intron_number | 22/28 | |||||||
C54D2.5a.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.2:c.4250-98C>T | |||||||
Intron_number | 25/32 | |||||||
C54D2.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5c.1:c.4250-53C>T | |||||||
Intron_number | 23/30 | |||||||
C54D2.5a.3 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5a.3:c.4250-98C>T | |||||||
Intron_number | 23/30 | |||||||
C54D2.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5d.1:c.4394-98C>T | |||||||
Intron_number | 24/31 | |||||||
C54D2.5e.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C54D2.5e.1:c.4271-98C>T | |||||||
Intron_number | 23/30 | |||||||
Method | WGS_Flibotte |