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WormBase Tree Display for Variation: WBVar01782312

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Name Class

WBVar01782312NamePublic_nameWBVar01782312
Other_namecewivar00483149
C54D2.5c.1:c.4250-53C>T
C54D2.5a.3:c.4250-98C>T
C54D2.5g.1:c.4271-53C>T
C54D2.5e.1:c.4271-98C>T
C54D2.5a.2:c.4250-98C>T
C54D2.5a.1:c.4250-98C>T
C54D2.5d.1:c.4394-98C>T
HGVSgCHROMOSOME_X:g.7851293G>A
Sequence_detailsSMapS_parentSequenceC54D2
Flanking_sequencesAGTGTAGCACAACAAGACGGTAGGAGAGGGGAATATTTTGGGGAGAATTTTGATGATTGC
Mapping_targetC54D2
Source_location225CHROMOSOME_X78512437851243From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023191From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000367
TranscriptC54D2.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.1:c.4250-98C>T
Intron_number24/31
C54D2.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5g.1:c.4271-53C>T
Intron_number22/28
C54D2.5a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.2:c.4250-98C>T
Intron_number25/32
C54D2.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5c.1:c.4250-53C>T
Intron_number23/30
C54D2.5a.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5a.3:c.4250-98C>T
Intron_number23/30
C54D2.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5d.1:c.4394-98C>T
Intron_number24/31
C54D2.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC54D2.5e.1:c.4271-98C>T
Intron_number23/30
MethodWGS_Flibotte