WormBase Tree Display for Variation: WBVar01777539
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WBVar01777539 | Name | Public_name | WBVar01777539 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00478249 | |||||||
CE16041:p.Cys160Ter | ||||||||
F44G3.10.1:c.480C>A | ||||||||
HGVSg | CHROMOSOME_V:g.16138852G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F44G3 | ||||
Flanking_sequences | TAAACGAGTAATTGTTACGGTTTCTCAATA | CAATTGCACTCCACAAATGCAAAACTAAGA | ||||||
Mapping_target | F44G3 | |||||||
Source_location | 225 | CHROMOSOME_V | 16138832 | 16138832 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00009710 | ||||||
Transcript | F44G3.10.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | |||||||
HGVSc | F44G3.10.1:c.480C>A | |||||||
HGVSp | CE16041:p.Cys160Ter | |||||||
cDNA_position | 493 | |||||||
CDS_position | 480 | |||||||
Protein_position | 160 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | tgC/tgA | |||||||
Amino_acid_change | C/* | |||||||
Method | WGS_Flibotte |