WormBase Tree Display for Variation: WBVar01762694
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WBVar01762694 | Name | Public_name | WBVar01762694 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00462616 | |||||||
CE40074:p.Lys347= | ||||||||
F56D12.1b.1:c.1461G>A | ||||||||
F56D12.1a.1:c.1461G>A | ||||||||
F56D12.1d.1:c.1041G>A | ||||||||
CE29047:p.Lys487= | ||||||||
CE33403:p.Lys487= | ||||||||
F56D12.1a.2:c.1461G>A | ||||||||
HGVSg | CHROMOSOME_II:g.1307184C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | F56D12 | ||||
Flanking_sequences | TTTTGTAGTTGCCAACCTATAAAGGAACTC | TTATCCTGCGAAAAAACGGCGCCAGTCAGC | ||||||
Mapping_target | F56D12 | |||||||
Source_location | 225 | CHROMOSOME_II | 1307191 | 1307191 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00000112 | ||||||
Transcript | F56D12.1b.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1b.1:c.1461G>A | |||||||
HGVSp | CE33403:p.Lys487= | |||||||
cDNA_position | 1463 | |||||||
CDS_position | 1461 | |||||||
Protein_position | 487 | |||||||
Exon_number | 7/8 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
F56D12.1a.2 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.2:c.1461G>A | |||||||
HGVSp | CE29047:p.Lys487= | |||||||
cDNA_position | 1560 | |||||||
CDS_position | 1461 | |||||||
Protein_position | 487 | |||||||
Exon_number | 8/10 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
F56D12.1a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1a.1:c.1461G>A | |||||||
HGVSp | CE29047:p.Lys487= | |||||||
cDNA_position | 1464 | |||||||
CDS_position | 1461 | |||||||
Protein_position | 487 | |||||||
Exon_number | 7/9 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
F56D12.1d.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | F56D12.1d.1:c.1041G>A | |||||||
HGVSp | CE40074:p.Lys347= | |||||||
cDNA_position | 1041 | |||||||
CDS_position | 1041 | |||||||
Protein_position | 347 | |||||||
Exon_number | 3/4 | |||||||
Codon_change | aaG/aaA | |||||||
Amino_acid_change | K | |||||||
Method | WGS_Flibotte |