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WormBase Tree Display for Variation: WBVar01762692

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Name Class

WBVar01762692NamePublic_nameWBVar01762692
Other_namecewivar00462614
F56D12.1a.1:c.1542C>T
F56D12.1a.2:c.1542C>T
F56D12.1b.1:c.*571C>T
CE40074:p.Ile374=
F56D12.1d.1:c.1122C>T
CE29047:p.Ile514=
HGVSgCHROMOSOME_II:g.1306535G>A
Sequence_detailsSMapS_parentSequenceF56D12
Flanking_sequencesTCTGGAGCCTCCGAATGGCTGCTGGCCGACATTGATCCAGTTGATTTGTCGTTGAGGTAC
Mapping_targetF56D12
Source_location225CHROMOSOME_II13065421306542From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00023191From_analysisMillion_mutation_project_reanalysis
WBStrain00023286From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000112
TranscriptF56D12.1b.1VEP_consequence3_prime_UTR_variant
VEP_impactMODIFIER
HGVScF56D12.1b.1:c.*571C>T
cDNA_position2112
Exon_number8/8
F56D12.1a.2VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.2:c.1542C>T
HGVSpCE29047:p.Ile514=
cDNA_position1641
CDS_position1542
Protein_position514
Exon_number9/10
Codon_changeatC/atT
Amino_acid_changeI
F56D12.1a.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1a.1:c.1542C>T
HGVSpCE29047:p.Ile514=
cDNA_position1545
CDS_position1542
Protein_position514
Exon_number8/9
Codon_changeatC/atT
Amino_acid_changeI
F56D12.1d.1VEP_consequencesynonymous_variant
VEP_impactLOW
HGVScF56D12.1d.1:c.1122C>T
HGVSpCE40074:p.Ile374=
cDNA_position1122
CDS_position1122
Protein_position374
Exon_number4/4
Codon_changeatC/atT
Amino_acid_changeI
MethodWGS_Flibotte