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WormBase Tree Display for Variation: WBVar01754733

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Name Class

WBVar01754733NamePublic_nameWBVar01754733
Other_namecewivar00454316
F53H2.1a.1:c.2550+4A>T
F53H2.1c.1:c.795+4A>T
F53H2.1b.1:c.2016+4A>T
HGVSgCHROMOSOME_V:g.20393060A>T
Sequence_detailsSMapS_parentSequenceF53H2
Flanking_sequencesGATGTAATGTTCAATAAAGTGTTAAAGGTATATATAAATTTGGCCAAGAGCATTTCAATT
Mapping_targetF53H2
Source_location225CHROMOSOME_V2039302920393029From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00010004
TranscriptF53H2.1a.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF53H2.1a.1:c.2550+4A>T
Intron_number21/21
F53H2.1c.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF53H2.1c.1:c.795+4A>T
Intron_number5/5
F53H2.1b.1VEP_consequencesplice_region_variant,intron_variant
VEP_impactLOW
HGVScF53H2.1b.1:c.2016+4A>T
Intron_number16/16
MethodWGS_Flibotte