WormBase Tree Display for Variation: WBVar01747523
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WBVar01747523 | Name | Public_name | WBVar01747523 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00446927 | |||||||
T20B3.7.2:c.208+355G>A | ||||||||
T20B3.7.1:c.208+355G>A | ||||||||
T20B3.2.1:c.691C>T | ||||||||
CE20087:p.Pro231Ser | ||||||||
HGVSg | CHROMOSOME_V:g.16833878G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | T20B3 | ||||
Flanking_sequences | CGGCGGCTTCTGGTTCTGGCTCGGCCTCTG | CTCGACTGGAGCAGCTAGTTCCACTGGTGC | ||||||
Mapping_target | T20B3 | |||||||
Source_location | 225 | CHROMOSOME_V | 16833856 | 16833856 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00006585 | ||||||
WBGene00004026 | ||||||||
Transcript | T20B3.2.1 | VEP_consequence | missense_variant | |||||
VEP_impact | MODERATE | |||||||
HGVSc | T20B3.2.1:c.691C>T | |||||||
HGVSp | CE20087:p.Pro231Ser | |||||||
cDNA_position | 710 | |||||||
CDS_position | 691 | |||||||
Protein_position | 231 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | Cca/Tca | |||||||
Amino_acid_change | P/S | |||||||
T20B3.7.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T20B3.7.1:c.208+355G>A | |||||||
Intron_number | 3/7 | |||||||
T20B3.7.2 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | T20B3.7.2:c.208+355G>A | |||||||
Intron_number | 2/6 | |||||||
Method | WGS_Flibotte |