WormBase Tree Display for Variation: WBVar01742870
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WBVar01742870 | Name | Public_name | WBVar01742870 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00442045 | |||||||
C50H2.1a.1:c.701+5G>T | ||||||||
C50H2.1b.1:c.701+5G>T | ||||||||
HGVSg | CHROMOSOME_V:g.9891814G>T | |||||||
Sequence_details | SMap | S_parent | Sequence | C50H2 | ||||
Flanking_sequences | TTCACAGAAAGTCAGTTTCTGAAACTGTAA | TTTTTTCTTAATTTATAAAAAAATGAAGTA | ||||||
Mapping_target | C50H2 | |||||||
Source_location | 225 | CHROMOSOME_V | 9891790 | 9891790 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008239 | ||||||
Transcript | C50H2.1b.1 | VEP_consequence | splice_region_variant,intron_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | C50H2.1b.1:c.701+5G>T | |||||||
Intron_number | 5/14 | |||||||
C50H2.1a.1 | VEP_consequence | splice_region_variant,intron_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | C50H2.1a.1:c.701+5G>T | |||||||
Intron_number | 5/14 | |||||||
Method | WGS_Flibotte |