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WormBase Tree Display for Variation: WBVar01731437

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Name Class

WBVar01731437NamePublic_nameWBVar01731437
Other_namecewivar00430115
C48D1.5d.1:c.475-1864G>A
C48D1.5c.1:c.553-1864G>A
C48D1.5e.1:c.421-1864G>A
C48D1.5f.1:c.343-1864G>A
HGVSgCHROMOSOME_IV:g.13226419G>A
Sequence_detailsSMapS_parentSequenceJC8
Flanking_sequencesTGTCTCGAAATCTTTTTTTGAAATTAGGTGTTTAAAATTGAGAAAGAGAAGCCTGGTTGA
Mapping_targetJC8
Source_location225CHROMOSOME_IV1322639513226395From_analysisMillion_mutation_project_reanalysis
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeNatural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryVC
AnalysisMillion_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00008178
TranscriptC48D1.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5e.1:c.421-1864G>A
Intron_number3/4
C48D1.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5c.1:c.553-1864G>A
Intron_number5/6
C48D1.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5f.1:c.343-1864G>A
Intron_number2/3
C48D1.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC48D1.5d.1:c.475-1864G>A
Intron_number4/6
MethodWGS_Flibotte