WormBase Tree Display for Variation: WBVar01731437
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WBVar01731437 | Name | Public_name | WBVar01731437 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00430115 | |||||||
C48D1.5d.1:c.475-1864G>A | ||||||||
C48D1.5c.1:c.553-1864G>A | ||||||||
C48D1.5e.1:c.421-1864G>A | ||||||||
C48D1.5f.1:c.343-1864G>A | ||||||||
HGVSg | CHROMOSOME_IV:g.13226419G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | JC8 | ||||
Flanking_sequences | TGTCTCGAAATCTTTTTTTGAAATTAGGTG | TTTAAAATTGAGAAAGAGAAGCCTGGTTGA | ||||||
Mapping_target | JC8 | |||||||
Source_location | 225 | CHROMOSOME_IV | 13226395 | 13226395 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00008178 | ||||||
Transcript | C48D1.5e.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | C48D1.5e.1:c.421-1864G>A | |||||||
Intron_number | 3/4 | |||||||
C48D1.5c.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C48D1.5c.1:c.553-1864G>A | |||||||
Intron_number | 5/6 | |||||||
C48D1.5f.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C48D1.5f.1:c.343-1864G>A | |||||||
Intron_number | 2/3 | |||||||
C48D1.5d.1 | VEP_consequence | intron_variant | ||||||
VEP_impact | MODIFIER | |||||||
HGVSc | C48D1.5d.1:c.475-1864G>A | |||||||
Intron_number | 4/6 | |||||||
Method | WGS_Flibotte |