WormBase Tree Display for Variation: WBVar01722453
expand all nodes | collapse all nodes | view schema
WBVar01722453 | Name | Public_name | WBVar01722453 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00420729 | |||||||
CE54095:p.Trp518Ter | ||||||||
C45G9.6a.1:c.1554G>A | ||||||||
HGVSg | CHROMOSOME_III:g.5040253G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | C45G9 | ||||
Flanking_sequences | AAACCCTGCATTACTCCATGAACGTCTTTG | CGATTCTTACGCAATTTCATCTTGCGGACA | ||||||
Mapping_target | C45G9 | |||||||
Source_location | 225 | CHROMOSOME_III | 5040217 | 5040217 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00016677 | ||||||
Transcript | C45G9.6a.1 | VEP_consequence | stop_gained | |||||
VEP_impact | HIGH | |||||||
HGVSc | C45G9.6a.1:c.1554G>A | |||||||
HGVSp | CE54095:p.Trp518Ter | |||||||
cDNA_position | 1815 | |||||||
CDS_position | 1554 | |||||||
Protein_position | 518 | |||||||
Exon_number | 10/11 | |||||||
Codon_change | tgG/tgA | |||||||
Amino_acid_change | W/* | |||||||
Method | WGS_Flibotte |