WormBase Tree Display for Variation: WBVar01710061
expand all nodes | collapse all nodes | view schema
WBVar01710061 | Name | Public_name | WBVar01710061 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00407687 | |||||||
R02F2.8.1:c.183C>T | ||||||||
CE00772:p.Leu61= | ||||||||
R02F2.2.1:c.2044-1510G>A | ||||||||
HGVSg | CHROMOSOME_III:g.5494894G>A | |||||||
Sequence_details | SMap | S_parent | Sequence | R02F2 | ||||
Flanking_sequences | AGTGTACAGTGAGAAAATGGAGCACAAGCT | AGCAAAATCAGTCCGGGGATTAAGCCCATT | ||||||
Mapping_target | R02F2 | |||||||
Source_location | 225 | CHROMOSOME_III | 5494855 | 5494855 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | G | A | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00019837 | ||||||
WBGene00019832 | ||||||||
Transcript | R02F2.2.1 | VEP_consequence | intron_variant | |||||
VEP_impact | MODIFIER | |||||||
HGVSc | R02F2.2.1:c.2044-1510G>A | |||||||
Intron_number | 11/18 | |||||||
R02F2.8.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | R02F2.8.1:c.183C>T | |||||||
HGVSp | CE00772:p.Leu61= | |||||||
cDNA_position | 198 | |||||||
CDS_position | 183 | |||||||
Protein_position | 61 | |||||||
Exon_number | 3/10 | |||||||
Codon_change | ctC/ctT | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |