WormBase Tree Display for Variation: WBVar01702796
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WBVar01702796 | Name | Public_name | WBVar01702796 | |||||
---|---|---|---|---|---|---|---|---|
Other_name | cewivar00400140 | |||||||
CE49093:p.Leu315= | ||||||||
Y41D4A.4e.1:c.943C>T | ||||||||
Y41D4A.4b.1:c.952C>T | ||||||||
CE21847:p.Leu315= | ||||||||
Y41D4A.4a.1:c.943C>T | ||||||||
CE48685:p.Leu247= | ||||||||
CE48539:p.Leu318= | ||||||||
Y41D4A.4c.1:c.739C>T | ||||||||
HGVSg | CHROMOSOME_IV:g.1749834C>T | |||||||
Sequence_details | SMap | S_parent | Sequence | Y41D4A | ||||
Flanking_sequences | GAAAATTGAAAAATTTGCAGACGCGGCTCC | TACTCTCCGCCGCAATCTTCGTCTACGCCG | ||||||
Mapping_target | Y41D4A | |||||||
Source_location | 225 | CHROMOSOME_IV | 1749833 | 1749833 | From_analysis | Million_mutation_project_reanalysis | ||
Type_of_mutation | Substitution | C | T | |||||
SeqStatus | Sequenced | |||||||
Variation_type | Natural_variant | |||||||
Origin | Species | Caenorhabditis elegans | ||||||
Strain | WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||||
WBStrain00022852 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00022856 | From_analysis | Million_mutation_project_reanalysis | ||||||
WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | ||||||
Laboratory | VC | |||||||
Analysis | Million_mutation_project_reanalysis | |||||||
Status | Live | |||||||
Affects | Gene | WBGene00021506 | ||||||
Transcript | Y41D4A.4e.1 | VEP_consequence | synonymous_variant | |||||
VEP_impact | LOW | |||||||
HGVSc | Y41D4A.4e.1:c.943C>T | |||||||
HGVSp | CE49093:p.Leu315= | |||||||
cDNA_position | 943 | |||||||
CDS_position | 943 | |||||||
Protein_position | 315 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | Cta/Tta | |||||||
Amino_acid_change | L | |||||||
Y41D4A.4b.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y41D4A.4b.1:c.952C>T | |||||||
HGVSp | CE48539:p.Leu318= | |||||||
cDNA_position | 952 | |||||||
CDS_position | 952 | |||||||
Protein_position | 318 | |||||||
Exon_number | 5/6 | |||||||
Codon_change | Cta/Tta | |||||||
Amino_acid_change | L | |||||||
Y41D4A.4a.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y41D4A.4a.1:c.943C>T | |||||||
HGVSp | CE21847:p.Leu315= | |||||||
cDNA_position | 945 | |||||||
CDS_position | 943 | |||||||
Protein_position | 315 | |||||||
Exon_number | 6/8 | |||||||
Codon_change | Cta/Tta | |||||||
Amino_acid_change | L | |||||||
Y41D4A.4c.1 | VEP_consequence | synonymous_variant | ||||||
VEP_impact | LOW | |||||||
HGVSc | Y41D4A.4c.1:c.739C>T | |||||||
HGVSp | CE48685:p.Leu247= | |||||||
cDNA_position | 739 | |||||||
CDS_position | 739 | |||||||
Protein_position | 247 | |||||||
Exon_number | 4/5 | |||||||
Codon_change | Cta/Tta | |||||||
Amino_acid_change | L | |||||||
Method | WGS_Flibotte |